MLOC_14372 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.347886.737016.515915.82947
LEAShoots from the seedlings (10 cm shoot stage)4.753364.902625.240683.92545
INF1Young developing inflorescences (5mm)10.04849.9078913.0167.92428
INF2Developing inflorescences (1-1.5 cm)11.921212.124111.647712.4198
ROORoots from the seedlings (10 cm shoot stage)4.207836.974855.604297.16524
NODDeveloping tillers at six leaf stage, 3rd internode7.747777.7154610.405325.0442
CAR5Developing grain, bracts removed (5 DPA)6.332856.275766.098275.63398
CAR15Developing grain, bracts removed (15 DPA)3.517323.635843.53167.25866



CDS Structure of MLOC_14372






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14372.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14372.1CUST_9205_PI427708080AvailableAvailablecontig_1567921 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g29310.2 +2 5e-88 294 142/228 (62%) 13106.m03027 protein ulp1 protease family protein, putative, expressed
TAIR PP10 AT1G60220.1 +2 8e-61 219 98/172 (57%) | Symbols: OTS1, ULP1D | UB-like protease 1D | chr1:22208332-22211910 FORWARD LENGTH=584