MLOC_14366 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains50.436724.199228.076126.1923
LEAShoots from the seedlings (10 cm shoot stage)18.69181.502534.059437.50441
INF1Young developing inflorescences (5mm)69.13784.3534105.11253.2257
INF2Developing inflorescences (1-1.5 cm)39.52858.707763.692847.4829
ROORoots from the seedlings (10 cm shoot stage)40.156619.623731.44323.0334
NODDeveloping tillers at six leaf stage, 3rd internode1.158890.34590.5682113.46773
CAR5Developing grain, bracts removed (5 DPA)13.978515.210517.141812.5152
CAR15Developing grain, bracts removed (15 DPA)1.518821.127042.220393.48638



CDS Structure of MLOC_14366






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14366.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14366.1CUST_11416_PI427708083AvailableAvailablecontig_1567903 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g05730.1 +1 4e-17 77 38/39 (97%) 13111.m00557 protein histone H3, putative, expressed
TAIR PP10 AT5G65360.1 +1 2e-17 77 38/39 (97%) Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136