- Predicted Gene MLOC_14344
MLOC_14344 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 26.031 | 19.9957 | 20.8214 | 19.7369 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.1348 | 12.6813 | 15.7354 | 11.61 |
| INF1 | Young developing inflorescences (5mm) | 19.4991 | 23.7376 | 24.477 | 18.9041 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.9194 | 23.6327 | 20.3589 | 23.8821 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 27.713 | 20.8853 | 16.5025 | 21.6054 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 14.9639 | 21.9069 | 30.0624 | 60.6962 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.3038 | 21.8755 | 16.3883 | 18.1166 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.85484 | 3.65813 | 3.60615 | 9.94617 |
CDS Structure of MLOC_14344
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14344.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g26370.1 |
+3 |
2e-44 |
154 |
119/165 (72%) |
13102.m02852 protein wiskott-Aldrich syndrome protein family member 2, putative, expressed |
| TAIR PP10 |
AT2G18910.1 |
+3 |
8e-16 |
74 |
31/65 (48%) |
hydroxyproline-rich glycoprotein family protein | chr2:8193016-8194131 REVERSE LENGTH=131 |
