MLOC_14326 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.906381.316331.691761.66304
LEAShoots from the seedlings (10 cm shoot stage)2.541592.588512.931692.34225
INF1Young developing inflorescences (5mm)7.112058.669659.521657.78079
INF2Developing inflorescences (1-1.5 cm)9.849.8489110.767311.5723
ROORoots from the seedlings (10 cm shoot stage)0.817632.566961.515222.8142
NODDeveloping tillers at six leaf stage, 3rd internode1.291543.164463.5045310.1441
CAR5Developing grain, bracts removed (5 DPA)12.521612.83611.245512.5986
CAR15Developing grain, bracts removed (15 DPA)3.598813.173.829948.89732



CDS Structure of MLOC_14326






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14326.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14326.3CUST_9200_PI427708080AvailableAvailablecontig_1567807 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g22030.1 +1 2e-47 169 121/286 (42%) 13106.m02362 protein AT hook motif domain containing protein, expressed
TAIR PP10 AT2G33620.4 +1 1e-34 132 76/156 (49%) AT hook motif DNA-binding family protein | chr2:14234749-14236563 FORWARD LENGTH=351