MLOC_14312 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.0914221.270619.496517.1394
LEAShoots from the seedlings (10 cm shoot stage)22.616526.470419.130119.6063
INF1Young developing inflorescences (5mm)21.618818.464320.674316.3473
INF2Developing inflorescences (1-1.5 cm)25.624927.320827.660428.0818
ROORoots from the seedlings (10 cm shoot stage)7.0079517.274113.849718.8366
NODDeveloping tillers at six leaf stage, 3rd internode13.518618.953316.283562.0385
CAR5Developing grain, bracts removed (5 DPA)31.407328.489330.346227.8237
CAR15Developing grain, bracts removed (15 DPA)19.49317.547919.178140.0694



CDS Structure of MLOC_14312






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14312.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14312.4CUST_9198_PI427708080AvailableAvailablecontig_1567764 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g02930.2 +1 9e-104 333 164/188 (87%) 13110.m00202 protein helicase SEN1, putative, expressed
TAIR PP10 AT4G30100.1 +1 0.0 1449 800/1374 (58%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:14714191-14719335 FORWARD LENGTH=1311