MLOC_14296 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.217118.550819.138720.8326
LEAShoots from the seedlings (10 cm shoot stage)22.520819.312221.878620.801
INF1Young developing inflorescences (5mm)40.485645.278348.809741.2731
INF2Developing inflorescences (1-1.5 cm)48.869750.230550.521958.8748
ROORoots from the seedlings (10 cm shoot stage)20.892823.864723.9932.5014
NODDeveloping tillers at six leaf stage, 3rd internode11.906618.393123.449177.1272
CAR5Developing grain, bracts removed (5 DPA)30.268829.768928.773231.7391
CAR15Developing grain, bracts removed (15 DPA)10.60958.3852610.021524.0856



CDS Structure of MLOC_14296






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14296.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14296.1CUST_9196_PI427708080AvailableAvailablecontig_1567722 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g49520.1 -2 8e-119 353 191/242 (79%) 13103.m05370 protein pinin/SDK/memA protein, putative, expressed
TAIR PP10 AT1G15200.1 -2 2e-76 244 119/193 (62%) protein-protein interaction regulator family protein | chr1:5228477-5231017 REVERSE LENGTH=423