MLOC_14288 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.899265.469595.334675.13582
LEAShoots from the seedlings (10 cm shoot stage)3.739723.54273.56412.75815
INF1Young developing inflorescences (5mm)11.311413.444314.523611.1166
INF2Developing inflorescences (1-1.5 cm)23.358223.819820.100724.5546
ROORoots from the seedlings (10 cm shoot stage)7.31097.026634.785466.95365
NODDeveloping tillers at six leaf stage, 3rd internode2.880974.63955.5672411.8707
CAR5Developing grain, bracts removed (5 DPA)12.197811.839311.178211.026
CAR15Developing grain, bracts removed (15 DPA)2.970293.001932.624326.94758



CDS Structure of MLOC_14288






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14288.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14288.1CUST_9192_PI427708080AvailableAvailablecontig_1567717 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g32270.3 -1 9e-84 277 161/337 (48%) 13111.m03143 protein N-rich protein, putative, expressed
TAIR PP10 AT5G61910.2 -1 3e-31 130 75/189 (40%) DCD (Development and Cell Death) domain protein | chr5:24861091-24863729 REVERSE LENGTH=738