MLOC_14264 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains52.538222.066325.915926.73
LEAShoots from the seedlings (10 cm shoot stage)21.72926.696511.883510.26
INF1Young developing inflorescences (5mm)44.741262.992766.9640.7559
INF2Developing inflorescences (1-1.5 cm)41.250755.779551.429747.5942
ROORoots from the seedlings (10 cm shoot stage)44.675119.779824.89624.0633
NODDeveloping tillers at six leaf stage, 3rd internode13.840725.539922.103360.6581
CAR5Developing grain, bracts removed (5 DPA)39.252145.789940.60735.8179
CAR15Developing grain, bracts removed (15 DPA)12.75929.740267.725121.6073



CDS Structure of MLOC_14264






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14264.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14264.1CUST_11413_PI427708083AvailableAvailablecontig_1567679 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g38560.1 -1 5e-13 64 32/32 (100%) 13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative
TAIR PP10 AT3G09480.1 -1 7e-13 63 31/32 (97%) Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126