- Predicted Gene MLOC_14249
MLOC_14249 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_14249_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_14249_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.18138 | 1.72446 | 1.65328 | 1.55175 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.55249 | 1.66633 | 0.873188 | 1.11802 |
INF1 | Young developing inflorescences (5mm) | 2.43129 | 2.51587 | 2.15787 | 2.03432 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.08673 | 2.3008 | 1.72546 | 2.30313 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.830051 | 1.34851 | 0.935923 | 1.42599 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.393865 | 0.739959 | 1.02868 | 2.61394 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.6047 | 2.37307 | 2.39424 | 2.36362 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.05217 | 0.872312 | 0.707698 | 2.07668 |
CDS Structure of MLOC_14249
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14249.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g06670.1 |
-1 |
2e-166 |
482 |
255/327 (78%) |
13111.m00674 protein expressed protein |
TAIR PP10 |
AT5G09580.1 |
-1 |
5e-93 |
293 |
165/323 (51%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53345.1); Has 53 Blast hits to 53 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr5:2972639-2974438 FORWARD LENGTH=393 |