MLOC_14249 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.181381.724461.653281.55175
LEAShoots from the seedlings (10 cm shoot stage)1.552491.666330.8731881.11802
INF1Young developing inflorescences (5mm)2.431292.515872.157872.03432
INF2Developing inflorescences (1-1.5 cm)2.086732.30081.725462.30313
ROORoots from the seedlings (10 cm shoot stage)0.8300511.348510.9359231.42599
NODDeveloping tillers at six leaf stage, 3rd internode0.3938650.7399591.028682.61394
CAR5Developing grain, bracts removed (5 DPA)2.60472.373072.394242.36362
CAR15Developing grain, bracts removed (15 DPA)1.052170.8723120.7076982.07668



CDS Structure of MLOC_14249






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14249.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14249.1CUST_9186_PI427708080AvailableAvailablecontig_1567646 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g06670.1 -1 2e-166 482 255/327 (78%) 13111.m00674 protein expressed protein
TAIR PP10 AT5G09580.1 -1 5e-93 293 165/323 (51%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53345.1); Has 53 Blast hits to 53 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr5:2972639-2974438 FORWARD LENGTH=393