MLOC_14248 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.748513.653423.21013.23519
LEAShoots from the seedlings (10 cm shoot stage)1.483511.320561.043141.04979
INF1Young developing inflorescences (5mm)11.544112.85411.95679.67916
INF2Developing inflorescences (1-1.5 cm)10.32979.845217.9013810.0388
ROORoots from the seedlings (10 cm shoot stage)1.174382.281811.83362.36549
NODDeveloping tillers at six leaf stage, 3rd internode0.1524710.2068320.3676590.729268
CAR5Developing grain, bracts removed (5 DPA)3.960583.394343.461513.34993
CAR15Developing grain, bracts removed (15 DPA)0.9549031.077180.8298722.13472



CDS Structure of MLOC_14248






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14248.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365324NoneNoneNoneNone
MLOC_14248.1CUST_1406_PI427708080AvailableAvailablecontig_1567646 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g06680.2 +3 2e-154 493 303/627 (48%) 13111.m00676 protein expressed protein
TAIR PP10 AT5G09840.1 +3 1e-65 241 111/192 (58%) Putative endonuclease or glycosyl hydrolase | chr5:3059027-3061970 FORWARD LENGTH=924