- Predicted Gene MLOC_14248
MLOC_14248 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.74851 | 3.65342 | 3.2101 | 3.23519 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.48351 | 1.32056 | 1.04314 | 1.04979 |
INF1 | Young developing inflorescences (5mm) | 11.5441 | 12.854 | 11.9567 | 9.67916 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.3297 | 9.84521 | 7.90138 | 10.0388 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.17438 | 2.28181 | 1.8336 | 2.36549 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.152471 | 0.206832 | 0.367659 | 0.729268 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.96058 | 3.39434 | 3.46151 | 3.34993 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.954903 | 1.07718 | 0.829872 | 2.13472 |
CDS Structure of MLOC_14248
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14248.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g06680.2 |
+3 |
2e-154 |
493 |
303/627 (48%) |
13111.m00676 protein expressed protein |
TAIR PP10 |
AT5G09840.1 |
+3 |
1e-65 |
241 |
111/192 (58%) |
Putative endonuclease or glycosyl hydrolase | chr5:3059027-3061970 FORWARD LENGTH=924 |