MLOC_14239 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.445545.982215.334555.89842
LEAShoots from the seedlings (10 cm shoot stage)1.168370.2045661.178910.635823
INF1Young developing inflorescences (5mm)14.085415.142713.99512.9857
INF2Developing inflorescences (1-1.5 cm)11.194513.760410.145613.8687
ROORoots from the seedlings (10 cm shoot stage)5.335614.68194.327474.81025
NODDeveloping tillers at six leaf stage, 3rd internode0.07914620.07857080.1059230.196875
CAR5Developing grain, bracts removed (5 DPA)18.255520.304217.147319.061
CAR15Developing grain, bracts removed (15 DPA)0.3492090.4713930.5168871.18067



CDS Structure of MLOC_14239






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14239.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356837NoneNoneNoneNone
MLOC_14239.1CUST_1403_PI427708080AvailableAvailablecontig_156763 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g32550.2 +3 0.0 691 362/447 (81%) 13109.m03247 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
TAIR PP10 AT3G07320.1 +3 2e-144 431 229/446 (51%) O-Glycosyl hydrolases family 17 protein | chr3:2332324-2333925 REVERSE LENGTH=460