- Predicted Gene MLOC_14236
MLOC_14236 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 77.1684 | 57.536 | 59.4555 | 69.9802 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 47.2336 | 30.6482 | 33.5027 | 32.3669 |
| INF1 | Young developing inflorescences (5mm) | 130.397 | 133.905 | 135.766 | 125.006 |
| INF2 | Developing inflorescences (1-1.5 cm) | 115.102 | 126.452 | 140.43 | 146.737 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 72.0315 | 73.2441 | 75.6063 | 95.8142 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 28.953 | 38.4638 | 56.9355 | 119.73 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 71.8341 | 70.4884 | 63.2027 | 73.4227 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 48.1446 | 43.7751 | 50.041 | 117.707 |
CDS Structure of MLOC_14236
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14236.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g15310.1 |
+1 |
5e-84 |
262 |
163/212 (77%) |
13102.m01708 protein RNA recognition motif containing protein, expressed |
| TAIR PP10 |
AT3G55460.1 |
+1 |
1e-43 |
155 |
94/196 (48%) |
| Symbols: SCL30, At-SCL30 | SC35-like splicing factor 30 | chr3:20561024-20563502 FORWARD LENGTH=262 |