MLOC_14197 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.076632.543272.142832.36406
LEAShoots from the seedlings (10 cm shoot stage)7.772152.433027.284134.27658
INF1Young developing inflorescences (5mm)0.08503740.2085320.321340.183529
INF2Developing inflorescences (1-1.5 cm)00.028793200.0453936
ROORoots from the seedlings (10 cm shoot stage)1.87641.707822.197591.71302
NODDeveloping tillers at six leaf stage, 3rd internode1.115941.856043.796485.43979
CAR5Developing grain, bracts removed (5 DPA)33.347238.347632.135534.1626
CAR15Developing grain, bracts removed (15 DPA)5.885666.702915.6274515.5885



CDS Structure of MLOC_14197






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14197.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360464NoneNoneNoneNone
MLOC_14197.1CUST_1396_PI427708080AvailableAvailablecontig_1567519 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g08920.1 -1 6e-174 496 252/305 (83%) 13112.m00947 protein peroxidase precursor, putative, expressed
TAIR PP10 AT4G25980.1 -1 6e-102 313 168/305 (55%) Peroxidase superfamily protein | chr4:13189393-13191507 FORWARD LENGTH=371