MLOC_14139 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains40.161136.63337.471240.3443
LEAShoots from the seedlings (10 cm shoot stage)29.665119.852723.145721.4125
INF1Young developing inflorescences (5mm)31.077733.522734.525928.8576
INF2Developing inflorescences (1-1.5 cm)28.250432.336836.128135.6011
ROORoots from the seedlings (10 cm shoot stage)31.150537.97936.512546.2506
NODDeveloping tillers at six leaf stage, 3rd internode43.786438.769337.0886131.054
CAR5Developing grain, bracts removed (5 DPA)43.05543.058543.128642.8044
CAR15Developing grain, bracts removed (15 DPA)19.537517.068419.018344.3986



CDS Structure of MLOC_14139






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14139.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250984.1NoneNoneNoneNone
MLOC_14139.2CUST_1389_PI427708080AvailableAvailablecontig_1567360 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g44010.5 -3 0.0 640 314/351 (89%) 13108.m04766 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT1G20540.1 -3 3e-172 495 236/351 (67%) Transducin/WD40 repeat-like superfamily protein | chr1:7112652-7115191 FORWARD LENGTH=351