MLOC_14121 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.861218.158616.021711.483
LEAShoots from the seedlings (10 cm shoot stage)26.083227.767624.367719.998
INF1Young developing inflorescences (5mm)22.929322.243923.717816.2767
INF2Developing inflorescences (1-1.5 cm)32.937727.04926.261328.081
ROORoots from the seedlings (10 cm shoot stage)13.40423.829517.821922.5347
NODDeveloping tillers at six leaf stage, 3rd internode14.709417.491821.522456.0873
CAR5Developing grain, bracts removed (5 DPA)19.839816.854120.094315.6641
CAR15Developing grain, bracts removed (15 DPA)13.384713.722912.582925.3468



CDS Structure of MLOC_14121






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14121.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_14121.1CUST_9175_PI427708080AvailableAvailablecontig_1567298 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g15700.1 +3 0.0 1952 1094/1617 (68%) 13106.m01735 protein expressed protein
TAIR PP10 AT3G19190.1 +3 0.0 658 501/1601 (31%) | Symbols: ATATG2, ATG2 | autophagy 2 | chr3:6639879-6648274 FORWARD LENGTH=1839