MLOC_14118 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.254625.514224.11820.2922
LEAShoots from the seedlings (10 cm shoot stage)284.19339.684262.592246.836
INF1Young developing inflorescences (5mm)89.255479.740867.80863.06
INF2Developing inflorescences (1-1.5 cm)109.50983.935283.669495.5124
ROORoots from the seedlings (10 cm shoot stage)44.378385.234169.716692.4167
NODDeveloping tillers at six leaf stage, 3rd internode206.715236.945390.272884.194
CAR5Developing grain, bracts removed (5 DPA)55.864323.192720.562230.0874
CAR15Developing grain, bracts removed (15 DPA)6.339786.255647.240113.4038



CDS Structure of MLOC_14118






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14118.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360966NoneNoneNoneNone
MLOC_14118.2CUST_1387_PI427708080AvailableAvailablecontig_1567295 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g06110.5 +1 0.0 874 524/724 (72%) 13108.m00610 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT1G01060.3 +1 7e-78 273 269/747 (36%) | Symbols: LHY, LHY1 | Homeodomain-like superfamily protein | chr1:33992-37061 REVERSE LENGTH=645