- Predicted Gene MLOC_14118
MLOC_14118 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 11.2546 | 25.5142 | 24.118 | 20.2922 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 284.19 | 339.684 | 262.592 | 246.836 |
INF1 | Young developing inflorescences (5mm) | 89.2554 | 79.7408 | 67.808 | 63.06 |
INF2 | Developing inflorescences (1-1.5 cm) | 109.509 | 83.9352 | 83.6694 | 95.5124 |
ROO | Roots from the seedlings (10 cm shoot stage) | 44.3783 | 85.2341 | 69.7166 | 92.4167 |
NOD | Developing tillers at six leaf stage, 3rd internode | 206.715 | 236.945 | 390.272 | 884.194 |
CAR5 | Developing grain, bracts removed (5 DPA) | 55.8643 | 23.1927 | 20.5622 | 30.0874 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.33978 | 6.25564 | 7.2401 | 13.4038 |
CDS Structure of MLOC_14118
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14118.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g06110.5 |
+1 |
0.0 |
874 |
524/724 (72%) |
13108.m00610 protein MYB family transcription factor, putative, expressed |
TAIR PP10 |
AT1G01060.3 |
+1 |
7e-78 |
273 |
269/747 (36%) |
| Symbols: LHY, LHY1 | Homeodomain-like superfamily protein | chr1:33992-37061 REVERSE LENGTH=645 |