- Predicted Gene MLOC_14078
MLOC_14078 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 76.1355 | 64.8636 | 77.6656 | 70.0111 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.4661 | 34.7074 | 37.1892 | 27.8791 |
| INF1 | Young developing inflorescences (5mm) | 48.0296 | 55.3684 | 57.8591 | 45.6967 |
| INF2 | Developing inflorescences (1-1.5 cm) | 39.7323 | 36.661 | 39.751 | 42.9069 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 66.0485 | 52.4743 | 76.055 | 67.3587 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 41.7487 | 26.1922 | 35.7738 | 80.2262 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 30.3294 | 36.0192 | 30.2896 | 33.1576 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.04363 | 5.55734 | 4.9307 | 14.9178 |
CDS Structure of MLOC_14078
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_14078.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g19400.1 |
+3 |
8e-44 |
146 |
92/108 (85%) |
13101.m02109 protein expressed protein |
| TAIR PP10 |
AT5G26800.1 |
+3 |
1e-22 |
91 |
55/80 (69%) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:9425224-9426485 FORWARD LENGTH=112 |