MLOC_14013 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains116.34293.334491.3903101.85
LEAShoots from the seedlings (10 cm shoot stage)84.995749.10343.250749.8666
INF1Young developing inflorescences (5mm)48.049445.118340.750639.6659
INF2Developing inflorescences (1-1.5 cm)46.627449.12345.80752.9482
ROORoots from the seedlings (10 cm shoot stage)167.129128.39595.8869155.957
NODDeveloping tillers at six leaf stage, 3rd internode85.0009105.60272.1349298.495
CAR5Developing grain, bracts removed (5 DPA)207.06206.136196.267204.411
CAR15Developing grain, bracts removed (15 DPA)58.441563.578356.3047140.05



CDS Structure of MLOC_14013






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_14013.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252072.1NoneNoneNoneNone
MLOC_14013.1CUST_1371_PI427708080AvailableAvailablecontig_1567041 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g33380.1 -2 0.0 583 289/311 (93%) 13105.m03450 protein fructose-bisphospate aldolase isozyme, putative, expressed
TAIR PP10 AT2G36460.1 -2 0.0 517 260/312 (83%) Aldolase superfamily protein | chr2:15296929-15298387 REVERSE LENGTH=358