MLOC_13974 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7534260.6899170.9841930.733733
LEAShoots from the seedlings (10 cm shoot stage)5.8150513.689915.05868.36259
INF1Young developing inflorescences (5mm)0.2131630.1168820.2410560.163023
INF2Developing inflorescences (1-1.5 cm)0.1210430.07996120.2828870.169149
ROORoots from the seedlings (10 cm shoot stage)1.070871.398561.342381.32833
NODDeveloping tillers at six leaf stage, 3rd internode0.4514030.8914230.5984842.01627
CAR5Developing grain, bracts removed (5 DPA)3.968543.651233.137773.52328
CAR15Developing grain, bracts removed (15 DPA)0.8213470.6915980.5496551.77391



CDS Structure of MLOC_13974






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13974.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358455NoneNoneNoneNone
MLOC_13974.1CUST_1366_PI427708080AvailableAvailablecontig_1566953 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g32760.1 +2 0.0 680 376/474 (79%) 13112.m03342 protein transporter family protein, putative, expressed
TAIR PP10 AT3G18830.1 +2 1e-135 412 219/467 (47%) | Symbols: ATPLT5, PMT5, ATPMT5 | polyol/monosaccharide transporter 5 | chr3:6489000-6491209 REVERSE LENGTH=539