MLOC_1396 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.090316.901118.081420.917
LEAShoots from the seedlings (10 cm shoot stage)1.736951.450910.5208551.0627
INF1Young developing inflorescences (5mm)0.2262240.2658340.1678330.231034
INF2Developing inflorescences (1-1.5 cm)0.3320150.5523230.2049780.527226
ROORoots from the seedlings (10 cm shoot stage)51.292633.318321.694841.8765
NODDeveloping tillers at six leaf stage, 3rd internode10.569712.19678.9160934.4187
CAR5Developing grain, bracts removed (5 DPA)3.301253.901093.888574.32553
CAR15Developing grain, bracts removed (15 DPA)0.09151310.1065960.3541950.493844



CDS Structure of MLOC_1396






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366435
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366435CUST_21294_PI427708080NoneNoneNone
MLOC_1396.2NoneAvailableAvailablecontig_112159 (Mapped)
MLOC_26412.1NoneAvailableNonecontig_1754088 (Not mapped)
MLOC_29576.1NoneAvailableNonecontig_2017807 (Not mapped)
MLOC_48091.1NoneAvailableNonecontig_317385 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----