MLOC_13945 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4604631.002550.9896020.672927
LEAShoots from the seedlings (10 cm shoot stage)0.9563690.5346271.319240.699167
INF1Young developing inflorescences (5mm)0.3694450.3290310.5002950.255932
INF2Developing inflorescences (1-1.5 cm)0.5402770.7565790.5881730.587678
ROORoots from the seedlings (10 cm shoot stage)0.5335190.8974030.1153720.756315
NODDeveloping tillers at six leaf stage, 3rd internode0.9510480.918551.257512.76565
CAR5Developing grain, bracts removed (5 DPA)0.9986971.201331.126120.892136
CAR15Developing grain, bracts removed (15 DPA)0.8783581.248261.399241.92935



CDS Structure of MLOC_13945






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13945.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13945.5CUST_9155_PI427708080AvailableAvailablecontig_1566884 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g06900.1 -1 0.0 637 341/578 (59%) 13101.m00686 protein verticillium wilt disease resistance protein Ve2, putative, expressed
TAIR PP10 AT2G32660.1 -1 1e-117 369 226/596 (38%) | Symbols: AtRLP22, RLP22 | receptor like protein 22 | chr2:13853897-13855666 REVERSE LENGTH=589