MLOC_13938 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1487340.3996430.4351320.247034
LEAShoots from the seedlings (10 cm shoot stage)0.6602551.047981.794340.747008
INF1Young developing inflorescences (5mm)0.4124590.851520.7761440.403481
INF2Developing inflorescences (1-1.5 cm)1.101431.029060.7882960.858146
ROORoots from the seedlings (10 cm shoot stage)0.2459040.2741150.3718970.250215
NODDeveloping tillers at six leaf stage, 3rd internode0.4468981.305671.434083.22965
CAR5Developing grain, bracts removed (5 DPA)0.5495730.770280.6521440.466693
CAR15Developing grain, bracts removed (15 DPA)0.905040.8097050.8713831.48896



CDS Structure of MLOC_13938






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355234
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355234NoneNoneNoneNone
MLOC_13938.1NoneAvailableAvailablecontig_1566859 (Mapped)
MLOC_28529.1NoneAvailableNonecontig_1927260 (Not mapped)
MLOC_35196.2NoneAvailableNonecontig_246366 (Mapped)
MLOC_41579.1NoneAvailableNonecontig_2596177 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----