MLOC_13931 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.78632.0082.656962.38942
LEAShoots from the seedlings (10 cm shoot stage)2.383171.821842.358652.23991
INF1Young developing inflorescences (5mm)8.410466.562096.000366.44143
INF2Developing inflorescences (1-1.5 cm)6.474085.895015.89457.17808
ROORoots from the seedlings (10 cm shoot stage)1.013281.531222.252832.37584
NODDeveloping tillers at six leaf stage, 3rd internode0.08677140.05740050.07250850.248494
CAR5Developing grain, bracts removed (5 DPA)3.738633.871294.210964.27125
CAR15Developing grain, bracts removed (15 DPA)1.06511.025230.9760882.51227



CDS Structure of MLOC_13931






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13931.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13931.2CUST_9153_PI427708080AvailableAvailablecontig_156684 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05300.1 -3 2e-165 496 316/495 (64%) 13105.m00549 protein CRS1/YhbY domain containing protein, putative, expressed
TAIR PP10 AT3G27550.1 -3 6e-111 352 224/363 (62%) RNA-binding CRS1 / YhbY (CRM) domain protein | chr3:10208010-10209899 REVERSE LENGTH=491