- Predicted Gene MLOC_13931
MLOC_13931 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.7863 | 2.008 | 2.65696 | 2.38942 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.38317 | 1.82184 | 2.35865 | 2.23991 |
INF1 | Young developing inflorescences (5mm) | 8.41046 | 6.56209 | 6.00036 | 6.44143 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.47408 | 5.89501 | 5.8945 | 7.17808 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.01328 | 1.53122 | 2.25283 | 2.37584 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0867714 | 0.0574005 | 0.0725085 | 0.248494 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.73863 | 3.87129 | 4.21096 | 4.27125 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.0651 | 1.02523 | 0.976088 | 2.51227 |
CDS Structure of MLOC_13931
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13931.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g05300.1 |
-3 |
2e-165 |
496 |
316/495 (64%) |
13105.m00549 protein CRS1/YhbY domain containing protein, putative, expressed |
TAIR PP10 |
AT3G27550.1 |
-3 |
6e-111 |
352 |
224/363 (62%) |
RNA-binding CRS1 / YhbY (CRM) domain protein | chr3:10208010-10209899 REVERSE LENGTH=491 |