- Predicted Gene MLOC_13930
MLOC_13930 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.3788 | 14.8647 | 13.77 | 13.0285 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.9087 | 11.5181 | 11.1811 | 10.1828 |
| INF1 | Young developing inflorescences (5mm) | 26.6522 | 24.087 | 25.306 | 20.1271 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.3386 | 20.8261 | 19.4942 | 20.6208 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.60264 | 13.1911 | 9.70403 | 13.794 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.55497 | 7.15533 | 6.76261 | 23.9677 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 19.6296 | 18.0359 | 18.0304 | 17.235 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.167 | 9.12094 | 7.90249 | 18.0526 |
CDS Structure of MLOC_13930
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13930.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g05310.2 |
+1 |
0.0 |
837 |
426/620 (69%) |
13105.m00551 protein Fibronectin type III domain containing protein, expressed |
| TAIR PP10 |
AT3G24440.1 |
+1 |
4e-128 |
402 |
237/598 (40%) |
| Symbols: VRN5, VIL1 | Fibronectin type III domain-containing protein | chr3:8876207-8878171 REVERSE LENGTH=602 |