MLOC_13912 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains56.710358.211856.795971.0417
LEAShoots from the seedlings (10 cm shoot stage)40.257146.560841.15941.1351
INF1Young developing inflorescences (5mm)54.095859.305263.861457.3872
INF2Developing inflorescences (1-1.5 cm)65.394962.567170.434182.3628
ROORoots from the seedlings (10 cm shoot stage)45.03160.503472.986789.5095
NODDeveloping tillers at six leaf stage, 3rd internode49.260232.331229.2521109.309
CAR5Developing grain, bracts removed (5 DPA)65.434567.0875.469881.3421
CAR15Developing grain, bracts removed (15 DPA)34.945535.928536.301496.8808



CDS Structure of MLOC_13912






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13912.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248926.1NoneNoneNoneNone
MLOC_13912.4CUST_1358_PI427708080AvailableAvailablecontig_1566790 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g49530.1 -3 5e-174 502 266/339 (78%) 13106.m05306 protein OsFBX206 - F-box domain containing protein, expressed
TAIR PP10 AT5G45360.1 -3 4e-101 312 157/290 (54%) F-box family protein | chr5:18384783-18386670 REVERSE LENGTH=316