MLOC_13887 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3190810.3847250.2682820.36102
LEAShoots from the seedlings (10 cm shoot stage)0.7224590.4590430.4329980.431926
INF1Young developing inflorescences (5mm)0.2185120.08865540.1002990.117351
INF2Developing inflorescences (1-1.5 cm)0.1385190.1097460.2680810.198146
ROORoots from the seedlings (10 cm shoot stage)0.5066560.9586350.470171.00969
NODDeveloping tillers at six leaf stage, 3rd internode5.7120213.274518.833136.7361
CAR5Developing grain, bracts removed (5 DPA)0.03403270.07205190.1937790.0918454
CAR15Developing grain, bracts removed (15 DPA)0.213590.1132270.2704340.460322



CDS Structure of MLOC_13887






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13887.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355601NoneNoneNoneNone
MLOC_13887.2CUST_110_PI427708083AvailableAvailablecontig_1566739 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g14670.1 +2 7e-56 189 88/106 (83%) 13106.m01628 protein ODORANT1, putative, expressed
TAIR PP10 AT5G62320.1 +2 8e-50 144 66/94 (70%) | Symbols: MYB99, ATMYBCU15, ATMYB99 | myb domain protein 99 | chr5:25028885-25029786 REVERSE LENGTH=245