- Predicted Gene MLOC_13887
MLOC_13887 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13887_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_13887_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.319081 | 0.384725 | 0.268282 | 0.36102 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.722459 | 0.459043 | 0.432998 | 0.431926 |
INF1 | Young developing inflorescences (5mm) | 0.218512 | 0.0886554 | 0.100299 | 0.117351 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.138519 | 0.109746 | 0.268081 | 0.198146 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.506656 | 0.958635 | 0.47017 | 1.00969 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.71202 | 13.2745 | 18.8331 | 36.7361 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0340327 | 0.0720519 | 0.193779 | 0.0918454 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.21359 | 0.113227 | 0.270434 | 0.460322 |
CDS Structure of MLOC_13887
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13887.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g14670.1 |
+2 |
7e-56 |
189 |
88/106 (83%) |
13106.m01628 protein ODORANT1, putative, expressed |
TAIR PP10 |
AT5G62320.1 |
+2 |
8e-50 |
144 |
66/94 (70%) |
| Symbols: MYB99, ATMYBCU15, ATMYB99 | myb domain protein 99 | chr5:25028885-25029786 REVERSE LENGTH=245 |