MLOC_1387 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6840230.7013811.041980.732756
LEAShoots from the seedlings (10 cm shoot stage)0.4991810.3634470.6398630.378224
INF1Young developing inflorescences (5mm)0.5601880.3827260.5727780.422988
INF2Developing inflorescences (1-1.5 cm)0.4398840.1810.3166820.328117
ROORoots from the seedlings (10 cm shoot stage)1.109550.3723770.2338140.517747
NODDeveloping tillers at six leaf stage, 3rd internode0.2777430.2421161.502621.49572
CAR5Developing grain, bracts removed (5 DPA)000.02724970
CAR15Developing grain, bracts removed (15 DPA)0.01926240.046642900.073977



CDS Structure of MLOC_1387






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1387.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357265NoneNoneNoneNone
MLOC_1387.3CUST_68_PI427708080AvailableAvailablecontig_112119 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g70340.1 +2 1e-43 159 116/264 (44%) 13101.m07643 protein expressed protein
TAIR PP10 AT5G13250.1 +2 2e-23 102 99/364 (27%) RING finger protein | chr5:4234486-4241615 FORWARD LENGTH=387