MLOC_13869 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.743766.904235.947895.42565
LEAShoots from the seedlings (10 cm shoot stage)4.566234.985651.882633.12185
INF1Young developing inflorescences (5mm)2.848893.593993.250992.42851
INF2Developing inflorescences (1-1.5 cm)4.43494.029123.313394.04351
ROORoots from the seedlings (10 cm shoot stage)1.727184.403712.750474.36619
NODDeveloping tillers at six leaf stage, 3rd internode1.453792.140640.8999676.04224
CAR5Developing grain, bracts removed (5 DPA)3.257762.868932.860772.6477
CAR15Developing grain, bracts removed (15 DPA)1.196720.9006030.9984822.13497



CDS Structure of MLOC_13869






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13869.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13869.1CUST_9143_PI427708080AvailableAvailablecontig_1566692 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g51270.1 +2 0.0 1179 626/1056 (59%) 13106.m05531 protein 1,3-beta-glucan synthase component domain containing protein, expressed
TAIR PP10 AT1G06490.1 +2 0.0 1321 704/1042 (68%) | Symbols: ATGSL07, gsl07, atgsl7, GSL7 | glucan synthase-like 7 | chr1:1978762-1989295 FORWARD LENGTH=1958