MLOC_13868 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.730986.10072.851173.52394
LEAShoots from the seedlings (10 cm shoot stage)1.821322.293790.381071.186
INF1Young developing inflorescences (5mm)1.440532.567141.21671.39137
INF2Developing inflorescences (1-1.5 cm)1.558051.953951.410561.82318
ROORoots from the seedlings (10 cm shoot stage)0.2421492.895871.22662.65898
NODDeveloping tillers at six leaf stage, 3rd internode0.2218821.703950.4454144.55083
CAR5Developing grain, bracts removed (5 DPA)4.541452.147162.149042.76355
CAR15Developing grain, bracts removed (15 DPA)0.4832240.2509920.3597250.87326



CDS Structure of MLOC_13868






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13868.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13868.1CUST_2059_PI427708083AvailableAvailablecontig_1566692 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g34890.1 +1 5e-85 274 137/174 (79%) 13101.m03524 protein GLUCAN SYNTHASE-LIKE protein, putative
TAIR PP10 AT3G59100.1 +1 1e-59 203 105/176 (60%) | Symbols: ATGSL11, gsl11 | glucan synthase-like 11 | chr3:21843407-21853860 FORWARD LENGTH=1921