MLOC_13798 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.442412.279072.462152.42234
LEAShoots from the seedlings (10 cm shoot stage)2.189891.023421.572151.28005
INF1Young developing inflorescences (5mm)5.621296.637928.32876.41271
INF2Developing inflorescences (1-1.5 cm)3.817564.383695.236455.19036
ROORoots from the seedlings (10 cm shoot stage)6.882664.123265.843135.22111
NODDeveloping tillers at six leaf stage, 3rd internode3.676693.624974.6729.72897
CAR5Developing grain, bracts removed (5 DPA)2.374752.631062.589282.68671
CAR15Developing grain, bracts removed (15 DPA)1.688631.120051.945063.98398



CDS Structure of MLOC_13798






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13798.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366101NoneNoneNoneNone
MLOC_13798.2CUST_1345_PI427708080AvailableAvailablecontig_1566561 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g48950.1 -3 0.0 825 406/433 (94%) 13104.m04997 protein fringe-related protein, putative, expressed
TAIR PP10 AT4G23490.1 -3 0.0 551 274/432 (63%) Protein of unknown function (DUF604) | chr4:12251580-12253973 REVERSE LENGTH=526