- Predicted Gene MLOC_13772
MLOC_13772 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.14051 | 2.625 | 3.00905 | 2.82462 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.67744 | 0.99756 | 1.65442 | 1.49427 |
| INF1 | Young developing inflorescences (5mm) | 0.53579 | 0.98029 | 0.89756 | 0.671891 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.312014 | 0.670413 | 0.357065 | 0.524576 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.13924 | 5.66531 | 6.93093 | 7.02371 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.50404 | 10.6931 | 5.43224 | 28.8095 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.43404 | 1.57096 | 2.11451 | 1.98929 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.471185 | 0.172793 | 0.631032 | 0.935786 |
CDS Structure of MLOC_13772
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13772.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g39060.1 |
+2 |
4e-68 |
216 |
117/142 (82%) |
13105.m04111 protein expressed protein |
| TAIR PP10 |
AT4G08330.1 |
+2 |
5e-30 |
115 |
71/134 (53%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:5255384-5256525 REVERSE LENGTH=164 |