MLOC_13768 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.382815.753917.593516.711
LEAShoots from the seedlings (10 cm shoot stage)8.202287.086039.161896.84002
INF1Young developing inflorescences (5mm)4.795795.840556.356995.00975
INF2Developing inflorescences (1-1.5 cm)4.340844.475314.931885.15151
ROORoots from the seedlings (10 cm shoot stage)24.148816.689314.324820.0932
NODDeveloping tillers at six leaf stage, 3rd internode14.994614.37726.8034839.693
CAR5Developing grain, bracts removed (5 DPA)11.25512.043312.57112.0948
CAR15Developing grain, bracts removed (15 DPA)3.252023.081363.515297.85015



CDS Structure of MLOC_13768






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13768.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370471NoneNoneNoneNone
MLOC_13768.1CUST_1341_PI427708080AvailableAvailablecontig_1566469 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g08140.1 -1 0.0 568 280/348 (80%) 13106.m00851 protein protein phosphatase 2C, putative, expressed
TAIR PP10 AT2G25620.1 -1 9e-114 348 178/313 (57%) | Symbols: AtDBP1, DBP1 | DNA-binding protein phosphatase 1 | chr2:10903154-10904978 REVERSE LENGTH=392