- Predicted Gene MLOC_13742
MLOC_13742 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 327.278 | 286.562 | 288.852 | 304.467 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 141.442 | 145.999 | 178.805 | 130.585 |
INF1 | Young developing inflorescences (5mm) | 98.0834 | 128.345 | 109.896 | 97.3662 |
INF2 | Developing inflorescences (1-1.5 cm) | 57.2594 | 65.2322 | 62.8495 | 68.1829 |
ROO | Roots from the seedlings (10 cm shoot stage) | 348.38 | 404.933 | 399.041 | 469.567 |
NOD | Developing tillers at six leaf stage, 3rd internode | 172.637 | 173.508 | 139.098 | 547.033 |
CAR5 | Developing grain, bracts removed (5 DPA) | 331.255 | 320.512 | 304.837 | 311.126 |
CAR15 | Developing grain, bracts removed (15 DPA) | 841.743 | 795.139 | 768.214 | 1928.13 |
CDS Structure of MLOC_13742
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13742.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g55540.1 |
+1 |
0.0 |
825 |
424/460 (92%) |
13101.m05856 protein aminotransferase, classes I and II, domain containing protein, expressed |
TAIR PP10 |
AT5G11520.1 |
+1 |
0.0 |
693 |
343/452 (76%) |
| Symbols: ASP3, YLS4 | aspartate aminotransferase 3 | chr5:3685257-3687721 REVERSE LENGTH=449 |