MLOC_13715 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.217118.566717.883515.2809
LEAShoots from the seedlings (10 cm shoot stage)19.47459.6394711.330110.92
INF1Young developing inflorescences (5mm)24.00124.392925.297517.9108
INF2Developing inflorescences (1-1.5 cm)20.929622.061221.078720.304
ROORoots from the seedlings (10 cm shoot stage)10.073511.766413.256311.8837
NODDeveloping tillers at six leaf stage, 3rd internode14.466918.342119.269754.616
CAR5Developing grain, bracts removed (5 DPA)14.912214.823615.21512.2225
CAR15Developing grain, bracts removed (15 DPA)2.773392.389392.935725.28325



CDS Structure of MLOC_13715






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13715.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13715.1CUST_2046_PI427708083AvailableAvailablecontig_1566334 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g34050.1 +1 7e-153 448 224/251 (89%) 13108.m03558 protein phosphofructokinase, putative
TAIR PP10 AT2G22480.1 +1 2e-122 369 181/245 (74%) | Symbols: PFK5 | phosphofructokinase 5 | chr2:9545670-9548414 FORWARD LENGTH=537