MLOC_13690 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains351.52203.052223.224242.915
LEAShoots from the seedlings (10 cm shoot stage)91.05175.276598.352670.3904
INF1Young developing inflorescences (5mm)78.803994.684897.255177.9675
INF2Developing inflorescences (1-1.5 cm)57.171859.851953.191462.2274
ROORoots from the seedlings (10 cm shoot stage)245.247155.927145.048186.815
NODDeveloping tillers at six leaf stage, 3rd internode122.525125.57695.9061335.42
CAR5Developing grain, bracts removed (5 DPA)81.47792.669381.546982.576
CAR15Developing grain, bracts removed (15 DPA)26.418425.465327.439262.5353



CDS Structure of MLOC_13690






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13690.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251532.1NoneNoneNoneNone
MLOC_13690.1CUST_1333_PI427708080AvailableAvailablecontig_1566254 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g31300.1 +1 2e-99 297 148/179 (83%) 13107.m03163 protein ATP synthase delta chain, mitochondrial precursor, putative, expressed
TAIR PP10 AT5G47030.1 +1 9e-87 264 127/169 (75%) ATPase, F1 complex, delta/epsilon subunit | chr5:19090384-19092034 FORWARD LENGTH=203