MLOC_13673 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.036312.249511.887814.1601
LEAShoots from the seedlings (10 cm shoot stage)21.66877.697269.4339112.3123
INF1Young developing inflorescences (5mm)17.882718.561618.340417.1776
INF2Developing inflorescences (1-1.5 cm)23.306124.494425.44930.2634
ROORoots from the seedlings (10 cm shoot stage)10.300814.341710.507419.9137
NODDeveloping tillers at six leaf stage, 3rd internode46.125741.728540.9537158.771
CAR5Developing grain, bracts removed (5 DPA)12.288211.853213.060213.9082
CAR15Developing grain, bracts removed (15 DPA)11.948610.80077.633228.0954



CDS Structure of MLOC_13673






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13673.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372492NoneNoneNoneNone
MLOC_13673.1CUST_17917_PI427708080AvailableAvailablecontig_1566213 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g44610.1 -2 1e-164 483 319/443 (72%) 13103.m04802 protein IQ calmodulin-binding motif domain containing protein, expressed
TAIR PP10 AT3G22190.2 -2 2e-48 176 179/437 (41%) | Symbols: IQD5 | IQ-domain 5 | chr3:7831280-7833512 REVERSE LENGTH=422