- Predicted Gene MLOC_13656
MLOC_13656 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.5835 | 15.6166 | 16.6204 | 17.314 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.15905 | 6.90913 | 7.999 | 6.53862 |
| INF1 | Young developing inflorescences (5mm) | 22.1337 | 24.5518 | 22.9691 | 20.3508 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.5489 | 17.7827 | 15.3724 | 18.15 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 23.4774 | 15.1381 | 14.0965 | 20.2008 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.46927 | 1.90478 | 4.15962 | 7.27372 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.5319 | 15.7196 | 17.3068 | 17.0262 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.62185 | 4.07679 | 3.80913 | 10.069 |
CDS Structure of MLOC_13656
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13656.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g34370.1 |
-1 |
2e-149 |
442 |
317/382 (83%) |
13110.m03058 protein expressed protein |
| TAIR PP10 |
AT5G61990.1 |
-1 |
7e-20 |
94 |
51/151 (34%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr5:24900186-24903110 REVERSE LENGTH=974 |
