- Predicted Gene MLOC_13638
MLOC_13638 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13638_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_13638_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 10.1965 | 10.2711 | 13.5377 | 13.3296 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.94985 | 3.52788 | 5.10434 | 4.14054 |
INF1 | Young developing inflorescences (5mm) | 0.630469 | 0.558129 | 0.426549 | 0.539592 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.539248 | 0.541214 | 0.491476 | 0.67743 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.2194 | 12.2971 | 10.5522 | 17.9901 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.05813 | 8.58925 | 2.6648 | 27.7844 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.3405 | 1.97397 | 1.43058 | 2.17784 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.10054 | 1.80941 | 2.35022 | 5.61428 |
CDS Structure of MLOC_13638
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13638.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g33350.1 |
-2 |
3e-81 |
259 |
133/212 (63%) |
13110.m02933 protein endo-beta-N-acetylglucosaminidase, putative, expressed |
TAIR PP10 |
AT3G07090.1 |
-2 |
2e-64 |
213 |
98/156 (63%) |
PPPDE putative thiol peptidase family protein | chr3:2243153-2244476 REVERSE LENGTH=265 |