MLOC_13638 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.196510.271113.537713.3296
LEAShoots from the seedlings (10 cm shoot stage)3.949853.527885.104344.14054
INF1Young developing inflorescences (5mm)0.6304690.5581290.4265490.539592
INF2Developing inflorescences (1-1.5 cm)0.5392480.5412140.4914760.67743
ROORoots from the seedlings (10 cm shoot stage)13.219412.297110.552217.9901
NODDeveloping tillers at six leaf stage, 3rd internode7.058138.589252.664827.7844
CAR5Developing grain, bracts removed (5 DPA)2.34051.973971.430582.17784
CAR15Developing grain, bracts removed (15 DPA)2.100541.809412.350225.61428



CDS Structure of MLOC_13638






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13638.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361233NoneNoneNoneNone
MLOC_13638.1CUST_1326_PI427708080AvailableAvailablecontig_1566127 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g33350.1 -2 3e-81 259 133/212 (63%) 13110.m02933 protein endo-beta-N-acetylglucosaminidase, putative, expressed
TAIR PP10 AT3G07090.1 -2 2e-64 213 98/156 (63%) PPPDE putative thiol peptidase family protein | chr3:2243153-2244476 REVERSE LENGTH=265