MLOC_13609 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.755583.278873.045022.45794
LEAShoots from the seedlings (10 cm shoot stage)2.459952.216021.291751.38704
INF1Young developing inflorescences (5mm)6.018215.287915.855463.9423
INF2Developing inflorescences (1-1.5 cm)2.971324.102754.174663.21167
ROORoots from the seedlings (10 cm shoot stage)1.435412.580335.281512.33685
NODDeveloping tillers at six leaf stage, 3rd internode3.16570.931841.969112.84928
CAR5Developing grain, bracts removed (5 DPA)3.027613.274523.307652.37111
CAR15Developing grain, bracts removed (15 DPA)0.9995940.7660690.974591.76653



CDS Structure of MLOC_13609






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13609.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13609.2CUST_2034_PI427708083AvailableAvailablecontig_1566071 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g15560.1 +2 2e-38 144 69/84 (82%) 13103.m01823 protein wibg, putative, expressed
TAIR PP10 AT1G11400.3 +2 2e-19 89 44/65 (68%) | Symbols: PYM | partner of Y14-MAGO | chr1:3838777-3839978 FORWARD LENGTH=204