- Predicted Gene MLOC_13604
MLOC_13604 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 11.0999 | 30.5885 | 25.7561 | 24.2125 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 58.9787 | 40.8505 | 43.3432 | 42.4206 |
INF1 | Young developing inflorescences (5mm) | 36.5688 | 25.8922 | 20.0348 | 23.2162 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.4208 | 20.5785 | 17.7054 | 20.445 |
ROO | Roots from the seedlings (10 cm shoot stage) | 30.1791 | 55.128 | 56.3171 | 63.7893 |
NOD | Developing tillers at six leaf stage, 3rd internode | 123.848 | 100.175 | 90.4726 | 349.653 |
CAR5 | Developing grain, bracts removed (5 DPA) | 64.8051 | 54.793 | 58.1528 | 55.4348 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.3816 | 9.42031 | 11.2159 | 22.991 |
CDS Structure of MLOC_13604
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13604.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g48960.1 |
-3 |
0.0 |
3778 |
1939/2130 (91%) |
13101.m05086 protein glutamate synthase, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT5G53460.3 |
-3 |
0.0 |
3251 |
1648/2104 (78%) |
| Symbols: GLT1 | NADH-dependent glutamate synthase 1 | chr5:21700518-21709629 FORWARD LENGTH=2208 |