MLOC_13603 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.173217.869338.446016.19034
LEAShoots from the seedlings (10 cm shoot stage)7.954938.198566.384034.86033
INF1Young developing inflorescences (5mm)9.461419.285886.981475.20976
INF2Developing inflorescences (1-1.5 cm)7.68726.625537.105335.98045
ROORoots from the seedlings (10 cm shoot stage)5.624324.994184.954814.59074
NODDeveloping tillers at six leaf stage, 3rd internode6.837516.150795.8096316.7663
CAR5Developing grain, bracts removed (5 DPA)7.880536.822129.179295.65087
CAR15Developing grain, bracts removed (15 DPA)1.756051.487981.580032.59274



CDS Structure of MLOC_13603






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13603.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13603.1NoneAvailableAvailablecontig_1566052 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g25460.1 -3 2e-44 169 80/89 (90%) 13107.m02518 protein ankyrin repeat domain containing protein, expressed
TAIR PP10 AT3G04470.1 -3 2e-19 92 46/89 (52%) Ankyrin repeat family protein | chr3:1189841-1191853 REVERSE LENGTH=640