MLOC_13599 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.321661.288950.9510791.21238
LEAShoots from the seedlings (10 cm shoot stage)2.975943.931961.876372.49009
INF1Young developing inflorescences (5mm)1.094891.064010.9997330.856457
INF2Developing inflorescences (1-1.5 cm)1.368971.989172.166891.94873
ROORoots from the seedlings (10 cm shoot stage)1.838764.812292.593165.19421
NODDeveloping tillers at six leaf stage, 3rd internode0.3027960.5507840.1803961.71511
CAR5Developing grain, bracts removed (5 DPA)1.205060.9453061.380211.06256
CAR15Developing grain, bracts removed (15 DPA)0.7006550.7236940.8365631.60414



CDS Structure of MLOC_13599






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13599.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249486.1NoneNoneNoneNone
MLOC_13599.2CUST_1316_PI427708080AvailableAvailablecontig_1566045 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g02000.3 -2 6e-119 352 175/233 (75%) 13106.m00113 protein adenylate kinase, putative, expressed
TAIR PP10 AT5G26667.3 -2 9e-83 256 119/185 (64%) | Symbols: PYR6 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:9276659-9278091 FORWARD LENGTH=202