- Predicted Gene MLOC_13552
MLOC_13552 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.9763 | 19.0249 | 11.5394 | 21.9214 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.51999 | 5.07706 | 4.1657 | 4.56923 |
| INF1 | Young developing inflorescences (5mm) | 16.7603 | 22.1722 | 15.9699 | 19.8366 |
| INF2 | Developing inflorescences (1-1.5 cm) | 79.4421 | 81.6995 | 88.6314 | 110.31 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.2849 | 13.9988 | 12.9762 | 20.0228 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.39234 | 1.44774 | 1.21033 | 7.78836 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.6654 | 24.476 | 23.5213 | 28.578 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.42028 | 3.27761 | 2.63147 | 9.1936 |
CDS Structure of MLOC_13552
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13552.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g39500.1 |
+2 |
3e-14 |
67 |
34/35 (97%) |
13109.m03961 protein ubiquitin fusion protein, putative, expressed |
| TAIR PP10 |
AT3G52590.1 |
+2 |
2e-14 |
67 |
34/35 (97%) |
| Symbols: UBQ1, EMB2167, ERD16, HAP4 | ubiquitin extension protein 1 | chr3:19505668-19506681 FORWARD LENGTH=128 |