- Predicted Gene MLOC_13551
MLOC_13551 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13551_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_13551_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.175502 | 0.177054 | 0.328401 | 0.208443 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.258183 | 0.0951237 | 0.0416616 | 0.115951 |
INF1 | Young developing inflorescences (5mm) | 0.110919 | 0.0734499 | 0.142444 | 0.087385 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.32313 | 0.133952 | 0.208121 | 0.238485 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.253788 | 0.493781 | 0.389852 | 0.509598 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0417675 | 0.0194358 | 0.0596938 | 0.0851715 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.99778 | 0.683809 | 1.08733 | 0.85732 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.858454 | 1.01659 | 0.925795 | 2.13703 |
CDS Structure of MLOC_13551
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13551.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g09640.1 |
-3 |
2e-53 |
163 |
102/268 (38%) |
13111.m01013 protein OsFBX408 - F-box domain containing protein, expressed |
TAIR PP10 |
AT3G59190.1 |
-3 |
1e-15 |
80 |
84/247 (34%) |
F-box/RNI-like superfamily protein | chr3:21884740-21886101 FORWARD LENGTH=388 |