- Predicted Gene MLOC_13546
MLOC_13546 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 26.5093 | 24.6145 | 25.1231 | 26.1911 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.9803 | 20.2693 | 19.0329 | 16.5643 |
| INF1 | Young developing inflorescences (5mm) | 12.3085 | 13.958 | 11.3698 | 11.0388 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.4076 | 12.7995 | 12.7812 | 13.8966 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 32.9446 | 30.0031 | 24.7751 | 35.4129 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.7615 | 22.5071 | 17.5932 | 65.2277 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 30.0417 | 29.1026 | 32.2395 | 29.58 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 15.0569 | 14.2407 | 14.1215 | 33.6621 |
CDS Structure of MLOC_13546
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13546.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g37984.2 |
+2 |
0.0 |
867 |
434/491 (88%) |
13103.m04128 protein amino acid permease family protein, putative, expressed |
| TAIR PP10 |
AT1G31830.2 |
+2 |
0.0 |
693 |
334/462 (72%) |
Amino acid permease family protein | chr1:11418875-11420314 REVERSE LENGTH=479 |
