- Predicted Gene MLOC_13520
MLOC_13520 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.84812 | 2.54507 | 1.56084 | 2.9863 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 24.8723 | 51.7554 | 113.363 | 62.1381 |
INF1 | Young developing inflorescences (5mm) | 1.7696 | 4.52558 | 8.92716 | 5.61841 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.141369 | 0.0681421 | 0 | 0.156565 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.50545 | 9.30945 | 8.15568 | 12.4333 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.05445 | 1.99052 | 4.49593 | 7.94836 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.79891 | 1.65913 | 1.58871 | 2.06075 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.344367 | 0.618687 | 0.318247 | 1.35384 |
CDS Structure of MLOC_13520
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13520.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g46480.3 |
+1 |
8e-24 |
98 |
70/168 (42%) |
13105.m04963 protein late embryogenesis abundant protein, group 3, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |