MLOC_13520 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.848122.545071.560842.9863
LEAShoots from the seedlings (10 cm shoot stage)24.872351.7554113.36362.1381
INF1Young developing inflorescences (5mm)1.76964.525588.927165.61841
INF2Developing inflorescences (1-1.5 cm)0.1413690.068142100.156565
ROORoots from the seedlings (10 cm shoot stage)8.505459.309458.1556812.4333
NODDeveloping tillers at six leaf stage, 3rd internode3.054451.990524.495937.94836
CAR5Developing grain, bracts removed (5 DPA)1.798911.659131.588712.06075
CAR15Developing grain, bracts removed (15 DPA)0.3443670.6186870.3182471.35384



CDS Structure of MLOC_13520






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13520.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249479.1NoneNoneNoneNone
MLOC_13520.1CUST_1306_PI427708080AvailableAvailablecontig_1565866 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g46480.3 +1 8e-24 98 70/168 (42%) 13105.m04963 protein late embryogenesis abundant protein, group 3, putative, expressed
TAIR PP10None-----