- Predicted Gene MLOC_13505
MLOC_13505 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13505_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_13505_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 15.7286 | 11.9938 | 11.9612 | 10.0621 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.50764 | 6.34752 | 6.70272 | 4.75145 |
INF1 | Young developing inflorescences (5mm) | 28.2397 | 31.4763 | 35.3789 | 19.6333 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.5937 | 23.9193 | 26.2129 | 19.8894 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.7548 | 12.4797 | 18.7153 | 12.4711 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.2599 | 3.0669 | 9.81002 | 11.3255 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.2181 | 19.1844 | 20.031 | 13.5409 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.81358 | 6.31302 | 5.62209 | 10.9087 |
CDS Structure of MLOC_13505
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13505.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g08810.1 |
+2 |
2e-36 |
137 |
61/77 (79%) |
13103.m01019 protein expressed protein |
TAIR PP10 |
AT5G62440.1 |
+2 |
3e-28 |
113 |
49/78 (63%) |
Protein of unknown function (DUF3223) | chr5:25072620-25073917 REVERSE LENGTH=202 |