MLOC_1349 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.807256.507373.841455.14141
LEAShoots from the seedlings (10 cm shoot stage)5.049413.963943.128533.22802
INF1Young developing inflorescences (5mm)8.9012313.073614.940211.7189
INF2Developing inflorescences (1-1.5 cm)10.036114.182710.21614.5745
ROORoots from the seedlings (10 cm shoot stage)3.973465.26083.986325.72258
NODDeveloping tillers at six leaf stage, 3rd internode1.603161.767253.666555.06904
CAR5Developing grain, bracts removed (5 DPA)3.685766.928184.439535.79254
CAR15Developing grain, bracts removed (15 DPA)0.9283180.6236170.9345292.17415



CDS Structure of MLOC_1349






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1349.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_1349.1CUST_11385_PI427708083AvailableAvailablecontig_11184 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g56970.1 -2 4e-15 74 36/45 (80%) 13103.m06237 protein actin, putative, expressed
TAIR PP10None-----