- Predicted Gene MLOC_13456
MLOC_13456 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_13456_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_13456_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.50672 | 4.94383 | 4.23173 | 4.42159 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.53897 | 8.38071 | 6.70789 | 6.3132 |
INF1 | Young developing inflorescences (5mm) | 9.46552 | 10.664 | 11.6886 | 8.06245 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.28525 | 9.95375 | 9.64711 | 9.64661 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.65778 | 3.48963 | 3.72866 | 3.81875 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.00799 | 3.64411 | 5.06284 | 13.249 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.82925 | 3.79448 | 4.05592 | 3.57145 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.53029 | 0.532264 | 0.414816 | 1.0734 |
CDS Structure of MLOC_13456
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_13456.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g16660.2 |
+2 |
8e-120 |
363 |
196/230 (85%) |
13102.m01866 protein cbxX, chromosomal, putative, expressed |
TAIR PP10 |
AT3G24530.1 |
+2 |
4e-103 |
323 |
172/229 (75%) |
AAA-type ATPase family protein / ankyrin repeat family protein | chr3:8945678-8947786 REVERSE LENGTH=481 |