MLOC_13454 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.154431.725212.447742.26696
LEAShoots from the seedlings (10 cm shoot stage)5.706086.184115.88565.0299
INF1Young developing inflorescences (5mm)2.47862.764992.992842.38899
INF2Developing inflorescences (1-1.5 cm)1.950912.274251.988812.32617
ROORoots from the seedlings (10 cm shoot stage)1.246352.210481.73672.31713
NODDeveloping tillers at six leaf stage, 3rd internode4.123939.458083.8284725.9654
CAR5Developing grain, bracts removed (5 DPA)6.400556.635226.051126.20988
CAR15Developing grain, bracts removed (15 DPA)2.876192.645522.379176.38188



CDS Structure of MLOC_13454






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_13454.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_13454.1NoneAvailableAvailablecontig_1565686 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g44770.1 -3 5e-50 183 83/93 (89%) 13102.m05011 protein uncharacterized mscS family protein, putative, expressed
TAIR PP10 AT2G17000.1 -3 1e-25 109 44/92 (48%) Mechanosensitive ion channel family protein | chr2:7388893-7392105 REVERSE LENGTH=849